User:Michael Strong/H1N1/NS1/MSA

H1N1 Swine Flu Multiple Sequence Alignment of NS1 Protein, 53 sequences


All Polymorphisms

gi|229598886_A/Texas/15/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKRRGNTL 50 gi|229892754_A/Canada-NS/RV153     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229536033_A/Minnesota/02/20     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229536107_A/Nebraska/02/200     MDSNTMSSFQVECFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229535811_A/Texas/09/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPLLDRLRRDQKSLKGRGNTL 50 gi|229396500_A/Ohio/07/2009        MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396477_A/New_York/19/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396402_A/New_York/31/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396413_A/New_York/23/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396387_A/New_York/18/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396449_A/New_York/15/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396351_A/New_York/12/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396373_A/New_York/11/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396433_A/New_York/10/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396363_A/New_York/06/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229484061_A/Canada-ON/RV152     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229535829_A/California/14/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229892761_A/Canada-ON/RV152     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229892770_A/Canada-ON/RV152     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229892764_A/Canada-AB/RV153     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237511869_A/Mexico/4108/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237511872_A/Mexico/4115/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237511860_A/Mexico/4486/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237511866_A/Mexico/4603/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237511857_A/Mexico/4604/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229892767_A/Canada-NS/RV153     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229892758_A/Mexico/InDRE411     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229783375_A/Korea/01/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229783386_A/New_York/1669/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229783407_A/New_York/1682/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229536016_A/Arizona/01/2009     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229536115_A/Michigan/02/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229535991_A/South_Carolina/     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229462691_A/Castilla-La         MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229462727_A/Castilla-La         MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229462715_A/Pais_Vasco/GP20     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229462703_A/Valencia/GP4/20     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229484054_A/Canada-NS/RV153     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229484058_A/Mexico/InDRE448     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229368684_A/Denmark/513/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396460_A/Texas/06/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229536007_A/Kansas/03/2009      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227977123_A/California/08/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227977155_A/California/08/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227809839_A/California/04/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227977111_A/California/04/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|228017753_A/California/06/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227977143_A/California/07/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227977167_A/California/07/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229299532_A/Texas/04/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227831789_A/Texas/05/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229299512_A/Texas/05/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237624336_A/swine/Alberta/O     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 ***********:*******************:************ *****

gi|229598886_A/Texas/15/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892754_A/Canada-NS/RV153     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEGMSR 100 gi|229536033_A/Minnesota/02/20     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSCYLSDMTLEEMSR 100 gi|229536107_A/Nebraska/02/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229535811_A/Texas/09/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396500_A/Ohio/07/2009        GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396477_A/New_York/19/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396402_A/New_York/31/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396413_A/New_York/23/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396387_A/New_York/18/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396449_A/New_York/15/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396351_A/New_York/12/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396373_A/New_York/11/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396433_A/New_York/10/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396363_A/New_York/06/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229484061_A/Canada-ON/RV152     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229535829_A/California/14/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892761_A/Canada-ON/RV152     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892770_A/Canada-ON/RV152     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892764_A/Canada-AB/RV153     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237511869_A/Mexico/4108/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237511872_A/Mexico/4115/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237511860_A/Mexico/4486/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237511866_A/Mexico/4603/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237511857_A/Mexico/4604/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892767_A/Canada-NS/RV153     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892758_A/Mexico/InDRE411     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229783375_A/Korea/01/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229783386_A/New_York/1669/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229783407_A/New_York/1682/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229536016_A/Arizona/01/2009     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229536115_A/Michigan/02/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229535991_A/South_Carolina/     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229462691_A/Castilla-La         GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229462727_A/Castilla-La         GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229462715_A/Pais_Vasco/GP20     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229462703_A/Valencia/GP4/20     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229484054_A/Canada-NS/RV153     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229484058_A/Mexico/InDRE448     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229368684_A/Denmark/513/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396460_A/Texas/06/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229536007_A/Kansas/03/2009      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227977123_A/California/08/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227977155_A/California/08/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227809839_A/California/04/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227977111_A/California/04/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|228017753_A/California/06/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227977143_A/California/07/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227977167_A/California/07/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229299532_A/Texas/04/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227831789_A/Texas/05/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229299512_A/Texas/05/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237624336_A/swine/Alberta/O     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 ************************************* ******** ***

gi|229598886_A/Texas/15/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892754_A/Canada-NS/RV153     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229536033_A/Minnesota/02/20     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229536107_A/Nebraska/02/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229535811_A/Texas/09/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396500_A/Ohio/07/2009        DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396477_A/New_York/19/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396402_A/New_York/31/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396413_A/New_York/23/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396387_A/New_York/18/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396449_A/New_York/15/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396351_A/New_York/12/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396373_A/New_York/11/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396433_A/New_York/10/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396363_A/New_York/06/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229484061_A/Canada-ON/RV152     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229535829_A/California/14/2     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892761_A/Canada-ON/RV152     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892770_A/Canada-ON/RV152     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892764_A/Canada-AB/RV153     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237511869_A/Mexico/4108/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237511872_A/Mexico/4115/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237511860_A/Mexico/4486/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237511866_A/Mexico/4603/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237511857_A/Mexico/4604/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892767_A/Canada-NS/RV153     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892758_A/Mexico/InDRE411     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229783375_A/Korea/01/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229783386_A/New_York/1669/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229783407_A/New_York/1682/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229536016_A/Arizona/01/2009     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229536115_A/Michigan/02/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229535991_A/South_Carolina/     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229462691_A/Castilla-La         DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229462727_A/Castilla-La         DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229462715_A/Pais_Vasco/GP20     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229462703_A/Valencia/GP4/20     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229484054_A/Canada-NS/RV153     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229484058_A/Mexico/InDRE448     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229368684_A/Denmark/513/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396460_A/Texas/06/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229536007_A/Kansas/03/2009      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227977123_A/California/08/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227977155_A/California/08/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227809839_A/California/04/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227977111_A/California/04/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|228017753_A/California/06/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227977143_A/California/07/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227977167_A/California/07/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229299532_A/Texas/04/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227831789_A/Texas/05/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229299512_A/Texas/05/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237624336_A/swine/Alberta/O     DWFTLMPRQKIIGPLCVRLDQAIMEKNIVLKANISVIFNRLETLILLRAF 150 *** ******************:**********:****************

gi|229598886_A/Texas/15/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892754_A/Canada-NS/RV153     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229536033_A/Minnesota/02/20     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229536107_A/Nebraska/02/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229535811_A/Texas/09/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396500_A/Ohio/07/2009        TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396477_A/New_York/19/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396402_A/New_York/31/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396413_A/New_York/23/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396387_A/New_York/18/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396449_A/New_York/15/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396351_A/New_York/12/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396373_A/New_York/11/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396433_A/New_York/10/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396363_A/New_York/06/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229484061_A/Canada-ON/RV152     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229535829_A/California/14/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892761_A/Canada-ON/RV152     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892770_A/Canada-ON/RV152     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892764_A/Canada-AB/RV153     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237511869_A/Mexico/4108/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237511872_A/Mexico/4115/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237511860_A/Mexico/4486/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237511866_A/Mexico/4603/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237511857_A/Mexico/4604/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892767_A/Canada-NS/RV153     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892758_A/Mexico/InDRE411     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229783375_A/Korea/01/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229783386_A/New_York/1669/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229783407_A/New_York/1682/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229536016_A/Arizona/01/2009     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229536115_A/Michigan/02/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229535991_A/South_Carolina/     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229462691_A/Castilla-La         TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229462727_A/Castilla-La         TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229462715_A/Pais_Vasco/GP20     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229462703_A/Valencia/GP4/20     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229484054_A/Canada-NS/RV153     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229484058_A/Mexico/InDRE448     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229368684_A/Denmark/513/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396460_A/Texas/06/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229536007_A/Kansas/03/2009      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227977123_A/California/08/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227977155_A/California/08/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227809839_A/California/04/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227977111_A/California/04/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|228017753_A/California/06/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227977143_A/California/07/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227977167_A/California/07/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229299532_A/Texas/04/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227831789_A/Texas/05/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229299512_A/Texas/05/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237624336_A/swine/Alberta/O     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 **************************************************

gi|229598886_A/Texas/15/2009       FAWRNCDENGRPSLPPEQK 219 gi|229892754_A/Canada-NS/RV153     FAWRNCDENGRPSLPPEQK 219 gi|229536033_A/Minnesota/02/20     FAWRNCDENGRPSLPPEQK 219 gi|229536107_A/Nebraska/02/200     FAWRNCDENGRPSLPPEQK 219 gi|229535811_A/Texas/09/2009       FAWRNCDENGRPSLPPEQK 219 gi|229396500_A/Ohio/07/2009        FAWRNCDENGRPSLPPEQK 219 gi|229396477_A/New_York/19/200     FAWRNCDENGRPSLPPEQK 219 gi|229396402_A/New_York/31/200     FAWRNCDENGRPSLPPEQK 219 gi|229396413_A/New_York/23/200     FAWRNCDENGRPSLPPEQK 219 gi|229396387_A/New_York/18/200     FAWRNCDENGRPSLPPEQK 219 gi|229396449_A/New_York/15/200     FAWRNCDENGRPSLPPEQK 219 gi|229396351_A/New_York/12/200     FAWRNCDENGRPSLPPEQK 219 gi|229396373_A/New_York/11/200     FAWRNCDENGRPSLPPEQK 219 gi|229396433_A/New_York/10/200     FAWRNCDENGRPSLPPEQK 219 gi|229396363_A/New_York/06/200     FAWRNCDENGRPSLPPEQK 219 gi|229484061_A/Canada-ON/RV152     FAWRNCDENGRPSLPPEQK 219 gi|229535829_A/California/14/2     FAWRNCDENGRPSLPPEQK 219 gi|229892761_A/Canada-ON/RV152     FAWRNCDENGRPSLPPEQK 219 gi|229892770_A/Canada-ON/RV152     FAWRNCDENGRPSLPPEQK 219 gi|229892764_A/Canada-AB/RV153     FAWRNCDENGRPSLPPEQK 219 gi|237511869_A/Mexico/4108/200     FAWRNCDENGRPSLPPEQK 219 gi|237511872_A/Mexico/4115/200     FAWRNCDENGRPSLPPEQK 219 gi|237511860_A/Mexico/4486/200     FAWRNCDENGRPSLPPEQK 219 gi|237511866_A/Mexico/4603/200     FAWRNCDENGRPSLPPEQK 219 gi|237511857_A/Mexico/4604/200     FAWRNCDENGRPSLPPEQK 219 gi|229892767_A/Canada-NS/RV153     FAWRNCDENGRPSLPPEQK 219 gi|229892758_A/Mexico/InDRE411     FAWRNCDENGRPSLPPEQK 219 gi|229783375_A/Korea/01/2009       FAWRNCDENGRPSLPPEQK 219 gi|229783386_A/New_York/1669/2     FAWRNCDENGRPSLPPEQK 219 gi|229783407_A/New_York/1682/2     FAWRNCDENGRPSLPPEQK 219 gi|229536016_A/Arizona/01/2009     FAWRNCDENGRPSLPPEQK 219 gi|229536115_A/Michigan/02/200     FAWRNCDENGRPSLPPEQK 219 gi|229535991_A/South_Carolina/     FAWRNCDENGRPSLPPEQK 219 gi|229462691_A/Castilla-La         FAWRNCDENGRPSLPPEQK 219 gi|229462727_A/Castilla-La         FAWRNCDENGRPSLPPEQK 219 gi|229462715_A/Pais_Vasco/GP20     FAWRNCDENGRPSLPPEQK 219 gi|229462703_A/Valencia/GP4/20     FAWRNCDENGRPSLPPEQK 219 gi|229484054_A/Canada-NS/RV153     FAWRNCDENGRPSLPPEQK 219 gi|229484058_A/Mexico/InDRE448     FAWRNCDENGRPSLPPEQK 219 gi|229368684_A/Denmark/513/200     FAWRNCDENGRPSLPPEQK 219 gi|229396460_A/Texas/06/2009       FAWRNCDENGRPSLPPEQK 219 gi|229536007_A/Kansas/03/2009      FAWRNCDENGRPSLPPEQK 219 gi|227977123_A/California/08/2     FAWRNCDENGRPSLPPEQK 219 gi|227977155_A/California/08/2     FAWRNCDENGRPSLPPEQK 219 gi|227809839_A/California/04/2     FAWRNCDENGRPSLPPEQK 219 gi|227977111_A/California/04/2     FAWRNCDENGRPSLPPEQK 219 gi|228017753_A/California/06/2     FAWRNCDENGRPSLPPEQK 219 gi|227977143_A/California/07/2     FAWRNCDENGRPSLPPEQK 219 gi|227977167_A/California/07/2     FAWRNCDENGRPSLPPEQK 219 gi|229299532_A/Texas/04/2009       FAWRNCDENGRPSLPPEQK 219 gi|227831789_A/Texas/05/2009       FAWRNCDENGRPSLPPEQK 219 gi|229299512_A/Texas/05/2009       FAWRNCDENGRPSLPPEQK 219 gi|237624336_A/swine/Alberta/O     FAWRNCDENGRPSLPPEQK 219 *******************